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...ssembles/maps reads gained by electrophoresis sequencing (aka Sanger sequencing) 454 pyro-sequencing (GS20, FLX or Titanium) Ion Torrent Solexa (Illumina) sequen...2942 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
...ng tools, MOSAIK can align reads generated by all the major sequencing technologies, including Illumina, Applied Biosystems SOLiD, Roche 454, Ion Torrent and Pacific BioSciences SMRT....2898 days ago
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Genome Assembly Tools and Software - PART2 !!
...tgun and EST sequence assembler for Sanger, 454, Solexa (Illumina), IonTorrent data and PacBio (the later at...ads. MaLTA – Transcriptome Assembly and Quantification from Ion Torrent RNA-Seq dataMaLTA is a m...2677 days ago
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Structure of Binary files used for storing sequencing data-bam and sff
...for those who looking for structure of Bam and sff file: Bam: http://samtools.sourceforge.net/SAMv1.pdf (from page 12) sff file (for Ion torrent and 454 files): http://www.n...3911 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...orts alignment from Illumina, Ion Torrent, 454 (Roche), and Pac Bio DN...ystem from Life Technologies, Ion Torrent system from Life Technologies...r NGS technologies (Illumina, Ion Torrent, Pac Bio and Roche 454) and p...Genome Analyzer, HiSeq, MiSeq, IonTorrent Software Suite: can upload s...2900 days ago
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- ...uses a profile-based approach to generate synthetic reads. It can simulate reads with different sequencing technologies, including Illumina, Ion Torrent, and PacBio. PIRS allows user...
406 days ago
- ...ration sequencing data. Originally developed for the Illumina system (historically known as “Solexa”), SolexaQA now also supports Ion Torrent and 454 data. Trim galore!&n...
2128 days ago
