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Results for "Trinity"

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• • Surabhi Chaudhary@surabhi

  

  RNA-Seq De novo Assembly Using Trinity

  Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied seq...

  Tags: Bioinformatics, NGS, RNA-seq, Assembly, Trinity, Illumina

  2956 days ago

• • Rahul Nayak@rahul

  

  Installing Trinity !

  Download this https://github.com/trinityrnaseq/trinityrnaseq/releases/tag/Trinity-v2.6.6 ➜ cd trinityrnaseq-Trinity-v2.6.6 ➜ trinityrnaseq-Trinity-v2.6.6 git:(master) ✗ make Using gnu compiler for Inchworm and Chrysalis cd Inchworm && (test -e configure || autoreconf) \ ...

  Tags: Installing, Trinity, RNA-seq, NGS, Assembly, Transcriptomics

  2124 days ago

• • Rahul Nayak@rahul

  

  Installing Salmon for Trinity !

  ➜ trinityrnaseq-Trinity-v2.6.6 git:(master) ✗ conda install salmon Solving environment: done ## Package Plan ## environment location: /home/urbe/anaconda3 added / updated specs: - salmon The following packages will be downloaded: package | ...

  Tags: salmon, NGS, Trinity, Conda, Anaconda

  2123 days ago