Results for "Workflow"
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Taverna Workflow Management System
...n open source domain independent Workflow Management System – a s...to design and execute scientific workflows. Taverna has been created by...Taverna Engine(used for enacting workflows) that powers both the Tavern...ne Tool for a quick execution of workflows from a terminal.3906 days ago
Collection of molecular modelling and drug design related tutorial ...
...on 2012. The Collection is meant to both highlight new scientific developments within the Rosetta community and provide a rigorously reproducible workflow for each protocol. This year'...3811 days ago
- ...ity control for small RNA This tutorial covers initial steps of the workflow for analysis of short RNA exp...to Galaxy, for those who are very new to Galaxy. Using Histories and Workflows, for those with some Galaxy...
3644 days ago
COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-acce...3565 days ago
Swabs to Genomes: A Comprehensive Workflow
...ay be interested in microbial genomics. The objective of the present study was to design, test, troubleshoot, and publish a simple, comprehensive workflow from the collection of an env...3547 days ago
- ...e supplied in a format that involves considerable preprocessing (see below for a description). The easiest way to use Blobsplorer is as part of a workflow using scripts from here.
2873 days ago
Linux command line exercises for NGS data processing
...p, sed, perl etc. Furthermore, having a command on awk will make it easier to understand advanced tutorials such as Illumina Amplicons Processing Workflow. In Linux, we use a shell th...2865 days ago
- ...ganellar genomes like the plastid genome (plastome) or the mitochondrial genome (chondriome). Nevertheless, you can upload any GenBank entry. The workflow is devided into three steps.&...
2810 days ago
- ...scriptome assembler. This means that it will output the variable regions of the transcripts, not reconstruct them entirely. KisSplice comes as a workflow, with several possible post-t...
2810 days ago
- ...sp;(FMD-index) as the key data structure. It is inspired by the string graph assembler (Simpson and Durbin, 2010 and 2012) and has a similar workflow.As a typical de novo assemble...
2786 days ago
