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Results for "consensus"

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• • Rahul Nayak@rahul

  

  Consensus assembly and allele interpretation pipeline. https://github.com/nmdp-bioinformatics/pipeline #Pipeline #Bioinformatics #Assembly

  3387 days ago

• • Jit@jit.aber

  

  Understanding #Overlap Layout #Consensus #assembly http://www.cs.jhu.edu/~langmea/resources/lecture_notes/assembly_olc.pdf #OLC #Assembly

  2610 days ago

• • Jit@jit.aber

  

  Comparison of the two major classes of #assembly algorithms: overlap–layout–consensus and de-bruijn-graph https://academic.oup.com/bfg/article/11/1/25/191455

  2359 days ago

• • Jit@jit.aber

  

  Overlap Layout Consensus assembly http://www.cs.jhu.edu/~langmea/resources/lecture_notes/assembly_olc.pdf #OLC #Assembly

  2358 days ago

• • Neelam Jha@neelam

  

  Consensus of nucleotide sequences https://www.perlmonks.org/bare/?node_id=500962 #Consensus #Nucleotide #DNA

  2023 days ago

• • Neelam Jha@neelam

  

  Generate consensus from BAM file samtools mpileup -uf chr5B_leaf_rust.fasta M27454_5B_reads_sorted.bam | bcftools call -c | vcfutils.pl vcf2fq #BAM #Consensus

  2023 days ago

• • Jit@jit.aber

  

  how to polish a genome assembly https://nanopolish.readthedocs.io/en/latest/quickstart_consensus.html #polish #nanopolish #ont #nanopore #consensus

  1923 days ago

• • Jit@jit.aber

  

  samtools mpileup -uf reference.nt mapping.bam | bcftools call -c | vcfutils.pl vcf2fq > consensus.fasta #Genome #Assembly #Reference

  1907 days ago

• • Abhimanyu Singh@abhimanyu

  

  Scripts to help transposable elements consensus sequences curation https://github.com/4ureliek/ReannTE #Transposable #TE #consensus #ReannTE

  1786 days ago

• • Jit@jit.aber

  

  #Calculate The #Frequency Of Letters In A Biological Sequence, Or The #Consensus Matrix Of A Set Of Sequences https://www.rdocumentation.org/packages/Biostrings/versions/2.40.2/topics/letterFrequency

  1514 days ago

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