Results for "fastx"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...uencing errors. Kelley et al, Genome Biol 11(11):R116, 2010. PubMed FastQC: a quality control tool for high-throughput sequence data. Home Page FASTX-toolkit: FASTQ/A short-reads...3770 days ago
Perl one-liner for bioinformatician !!!
...ound massive amounts of genomics text. There are several "standardized" file formats (FASTQ, SAM, VCF, etc.) and some tools for manipulating them (fastx toolkit, samtools, vcftools,...3619 days ago
- ...substr($0,2));} else if(NR%4==2) print;}' > file.fa FASTX-toolkit fastq_to_fasta is available in the FASTX-toolkit that scales really we...onvert fastq to fasta format using bioawk bioawk -c fastx '{print ">"$name"\n"$seq}'...
2296 days ago
