Results for "feature"
Bio-Scripts
...rTranches (BETA Tool) Gathers scattered VQSLOD tranches into a single file IndexFeatureFile Creates an index for a feature file, e.g. VCF or BED file....2066 days ago
Run Pango on your multifasta file !
...3:10:08 /home/jnarayan/anaconda3/envs/pangolin/lib/python3.8/site-packages/sklearn/base.py:438: UserWarning: X has feature names, but DecisionTreeClassifier was fitted without feature names warnings.warn( comp...878 days ago
Install Install Gffcompare on Ubuntu / Linux
#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compatible with the l...814 days ago
- #R is a feature rich interpretive programming language originally released in 1995. It is heavily used in the bioinformatics community largely due to numerous R libraries a...
814 days ago
- #You typically need the corresponding genome sequence file in FASTA format. The GFF file contains information about the #features (such as genes) in the genome, including their locati...
85 days ago
Python script to parse GFF file
def parse_gff(gff_file): features = [] with open(gff_file, 'r') as f:...s = line.strip().split('\t') feature = { 'seq...lit(';')) } features.append(feature) return...29 days ago
