Results for "miRNA"
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miRNA seed site determination in target mRNA?
Dear friends, While reading an article ("miR-143 is downregulated in cervical cancer and promotes apoptosis and inhibits tumor formation by targeting Bcl-2") I encounterd that they give seed site of miRNA but I do not understand how they achieve. Is there any method or tool to get any estimation...Tags: miRNA, mRNA, seed site, blast, nucleotides
3740 days ago
Integrated mRNA and microRNA transcriptome analysis in Strand NGS
Using a nasopharyngeal carcinoma case study, this paper highlights the integrated transcriptome analysis capabilities of Strand NGS demonstrating the identification of miRNA – mRNA interactions in regulatory networks.Read the application note on Integrated mRNA and microRNA transcripto...Tags: mRNA, miRNA, transcriptome, NGS data analysis, next generation sequencing, Strand NGS
3189 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall short RNA) expression using short-read deep sequencing data. In its present implementation MIRO is especially adapted for the analysis of reads generated with the Illumina sequencing pl...
Tags: Bioinformatics, MIRO, Omics, Genome, RNA, miRNA
2761 days ago
- If i have a set of miRNA sequences, what are the tools that are available to predict the target genes? I tried miRanda and mirdb, are there any tools or databases that do the same, as the rna is not already known i cant use targetscan etc. The tool must predict the target from the fasta seq...
Tags: miRNA, miRNA target gene, gene
2671 days ago
How to publish research paper on miRNA dataset?
I want to publish my research work on miRNA. I used online "freely" available miRNA dataset, with not known publications, and analysed it. Can you please suggest your experience publishing it in a good Impact Factor Journal? Is this possible to published it?Tags: Bioinformatics, Research Paper, miRNA
2633 days ago
