2737 days ago
2681 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this dom...2556 days ago
ASAR: Advanced metagenomic Sequence Analysis in R
An interactive data analysis tool for selection, aggregation and visualization of metagenomic data is presented. Functional analysis with a SEED hierarchy and pathway di...2118 days ago
REVIGO: Reduced Visualize gene ontology
REViGO can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based sc...2096 days ago
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
...notation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module,...tations for each gene based on multiple databases about pathways, diseases, and Gene Ontology. For Enrichment module, it can accept either...2016 days ago
KEGG Mapper – Reconstruct Pathway
Reconstruct Pathway is a KEGG PATHWAY mapping tool that assists genome and metagenome annotations. The input data...r. The mapping is performed through the K numbers against the KEGG reference pathways.&...1962 days ago
GeneOverlap: An R package to test and visualize gene overlaps
Overlapping gene lists can reveal biological meanings and may lead to novel hypothese...f histone H3 (H3K4me3) is associated with gene activation and its genome-wide enrichment can be mapped by using ChIP-s...1947 days ago
1943 days ago
ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-...variances from the data). By "cohort" we mean samples sequenced with the same enrichment kit with approximately the sa...1561 days ago