3255 days ago
BBTools for bioinformatician !
...ther lines are generally safe to ignore but they track other things, like read1- or read2-specific data, and random kmers versus the first kmer.It plots a point every X reads (config...2262 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
...s impractical to visualize each element on the same plot. But chromoMap plots provide a magnified view for...n sequential order (You will see in the demos below). Not ony that, the plots can be saved as HTML document...2132 days ago
Illumina based assembly pipeline steps !
...(iVar; amplicon data only) Duplicate read marking (picard; optional) Alignment-level QC (picard, SAMtools) Genome-wide and amplicon coverage QC plots (mosdepth) Choice of multipl...868 days ago
List of comparative genomics resources !
...omics tool for circular genomes Generate graphical maps of circular genomes that show sequence features, base composition plots, analysis results and sequence similarity plots. The ERGO -- Genome anal...668 days ago