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• • Abhi@abhinav

  

  Abhi created a new bio-script Installing manadatory software for websites hosting ! 1152 days ago
• • Abhi@abhinav

  

  Abhi created a new bio-script Remove Apache2 from Linux ! 1152 days ago
• • Abhi@abhinav

  

  Abhi created a new bio-script Bash script to simulate a genome ! 1154 days ago
• • Abhi@abhinav

  

  Abhi commented on the blog BBTools for bioinformatician ! 1154 days ago

  Latest download link at https://sourceforge.net/projects/bbmap/files/BBMap_38.94.tar.gz More at https://sourceforge.net/projects/bbmap/files/
• • Abhi@abhinav

  

  Abhi created a new bio-script Install Php on Ubuntu / Apache server ! 1155 days ago
• • Abhi@abhinav

  

  Abhi created a new bio-script Install MySQL on Ubuntu ! 1155 days ago
• • Abhi@abhinav

  

  Abhi bookmarked Apache server setting ! 1155 days ago

  Apache is an open source web server that’s available for Linux servers free of charge. In this tutorial we’ll be going through the steps of setting up an Apache server. What you’ll learn How to set up Apache Some basic Apache...

  https://ubuntu.com/tutorials/install-and-configure-apache#3-creating-your-own-website
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary created a new bio-script Installing Covid19 Environment ! 1159 days ago
• • Jitendra Narayan@admin

  

  Jitendra Narayan posted a new ad in the Opportunity Job offer for a postdoctoral researcher in genomics / bioinformatics (2 years) 1162 days ago
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary created a new bio-script Perl onliner to check the ids in two files ! 1163 days ago
• • Abhi@abhinav

  

  Abhi created a new bio-script Onliner to convert multi line fasta to single line fasta ! 1164 days ago
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary created a new bio-script Simulate the reads ! 1164 days ago
• • Abhi@abhinav

  

  Abhi bookmarked Understanding pango networks ! 1168 days ago

  In the vast majority of instances it is expected that Pango lineage names and designations will conform to the following rules. These rules also act as guidelines for the decisions made by the Lineage Designation...

  https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/
• • Abhi@abhinav

  

  Abhi published a blog post Basic Structure of Snakemake Pipeline Run ! 1170 days ago

  Brief Overview of Snakemake Pipeline Commands
• • Abhi@abhinav

  

  Abhi bookmarked UPGMA Worked Example 1171 days ago

  The tabs below include a walkthrough of clustering 7 biological sequences (A-G) using the Unweighted Pair-Group Method with Arithmetic mean (UPGMA) method. Note that UPGMA is actually a generic method and thus the walkthrough could apply to any...

  http://www.slimsuite.unsw.edu.au/teaching/upgma/
• • Abhi@abhinav

  

  Abhi bookmarked Introduction to phylogenies in R 1171 days ago

  R phylogenetics is built on the contributed packages for phylogenetics in R, and there are many such packages. Let's begin today by installing a few critical packages, such as ape, phangorn, phytools, and geiger. To get the most recent CRAN version...

  http://www.phytools.org/Cordoba2017/ex/2/Intro-to-phylogenies.html
• • Abhi@abhinav

  

  Abhi commented on the blog How to install Perl modules manually, using CPAN command, and other quick ways in the group Perl *PIPERs 1173 days ago

  If you are on Conda, you can try installing cpamn  https://anaconda.org/bioconda/perl-app-cpanminus and then cpanm install <name>  
• • Jit@jit.aber

  

  Jit bookmarked RNA-seq workflow: gene-level exploratory analysis and differential expression 1175 days ago

  Here we walk through an end-to-end gene-level RNA-seq differential expression workflow using Bioconductor packages. We will start from the FASTQ files, show how these were quantified to the reference transcripts, and prepare gene-level count...

  http://master.bioconductor.org/packages/release/workflows/vignettes/rnaseqGene/inst/doc/rnaseqGene.html
• • Jit@jit.aber

  

  Jit bookmarked PaReBrick: PArallel REarrangements and BReaks identification toolkit 1176 days ago

  PaReBrick. The tool takes a collection of strains represented as a sequence of oriented synteny blocks and a phylogenetic tree as input data. It identifies rearrangements, tests them for consistency with a tree, and sorts the events by their...

  https://github.com/ctlab/parallel-rearrangements
• • Jit@jit.aber

  

  Jit commented on a bookmark Far Manager Commands and Links ! 1176 days ago

  We press the combination Alt keys+ F1 or Alt + F2, in the menu that opens, select NetBox, it is under the number 2. Now we need to create a connection to our server. Let's say you have data for connecting via SSH:Login: root, password: pass,...

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