BOL

You might need to install libboost (I presume you are using Ubuntu) sudo apt-get install libboost-dev

i am using fastq dump to convert sra files into fastq. In case of fastq this tool gives me a message on terminal "Ignoring --- number of reads as the spot length is less than 1"). if my sra file is of 6GBs, i always get fastq file less than the...

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You might need to install libboost (I presume you are using Ubuntu) sudo apt-get install libboost-dev

Hi! I want to install LoRDEC using the following tutorial (https://biosphere.france-bioinformatique.fr/wikia2/index.php/Lordec). I am not able to install it in my linux system. Actually the 4th point of this installation tutorial is quite...

Hi! I want to install LoRDEC using the following tutorial (https://biosphere.france-bioinformatique.fr/wikia2/index.php/Lordec). I am not able to install it in my linux system. Actually the 4th point of this installation tutorial is quite...

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

How to calculate the coverage for a NGS experiment https://www.ecseq.com/support/ngs/how-to-calculate-the-coverage-for-a-sequencing-experiment #NGS #Coverage

Establishing a computational biology flipped classroom https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006764 #Teaching #Research

De novo Gene Birth https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008160 #Gene #Birth #Denovo

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

You can try this script https://github.com/jnarayan81/BioScripts/blob/master/runMapper.sh to map long reads.

HI! I am Nadia. I am trying to align PAcBio data (data from third generation sequencer) using bwa mem. I am getting very less number of aligned reads in SAM file having coverage of less than 10X. I tried to use minimap2 as well for alignment but...