Rahul Nayak
A Bioinformatician
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kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity
By Rahul Nayak 2160 days ago
https://github.com/kdmurray91/kwip
The k-mer Weighted Inner Product.
This software implements a de novo, alignment free measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is able to calculate the genetic dissimilarity between samples without any reference genome, and without assembling one.
De novo estimates of genetic relatedness from next-gen sequencing data https://kwip.readthedocs.org
