X BOL wishing you a very and Happy New year

Alternative content

Our Sponsors



Download BioinformaticsOnline(BOL) Apps in your chrome browser.




  • Bookmarks
  • BioJoker
  • ClipCrop: a tool for detecting structural variations with single-base resolution using...

ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information

https://github.com/shinout/clipcrop

ClipCrop for detecting SVs with single-base resolution using soft-clipping information. A soft-clipped sequence is an unmatched fragment in a partially mapped read. To assess the performance of ClipCrop with other SV-detecting tools, we generated various patterns of simulation data – SV lengths, read lengths, and the depth of coverage of short reads – with insertions, deletions, tandem duplications, inversions and single nucleotide alterations in a human chromosome.