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  • Minda: a tool for evaluating structural variant (SV) callers

Minda: a tool for evaluating structural variant (SV) callers

https://github.com/KolmogorovLab/minda

Minda is a tool for evaluating structural variant (SV) callers that

  • standardizes VCF records for compatibility with both germline and somatic SV callers,
  • benchmarks against a single VCF input file, or
  • benchmarks against an ensemble call set created from multiple VCF input files.