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  • Nucleus: Python and C++ code for reading and writing genomics data.

Nucleus: Python and C++ code for reading and writing genomics data.

https://github.com/google/nucleus

Nucleus is a library of Python and C++ code designed to make it easy to read, write and analyze data in common genomics file formats like SAM and VCF. In addition, Nucleus enables painless integration with the TensorFlow machine learning framework, as anywhere a genomics file is consumed or produced, a TensorFlow tfrecords file may be used instead.