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HNADOCK: a nucleic acid docking server for modeling RNA/DNA–RNA/DNA 3D complex structures

http://huanglab.phys.hust.edu.cn/hnadock/

The HNADOCK server is to predict the binding complex structure between two nucleic acid molecules through a hierarchical docking algorihtm of an FFT-based global search strategy and an intrinsic scoring function for nucleic acid interactions. Users are required to provide the three-dimensional (3D) structures of the two molecules to be docked.