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  • PhiSpy: PhiSpy identifies prophages in Bacterial (and probably Archaeal) genomes

PhiSpy: PhiSpy identifies prophages in Bacterial (and probably Archaeal) genomes

https://github.com/linsalrob/PhiSpy

PhiSpy identifies prophages in Bacterial (and probably Archaeal) genomes. Given an annotated genome it will use several approaches to identify the most likely prophage regions.

Initial versions of PhiSpy were written by

Sajia Akhter (sajia@stanford.eduEdwards Bioinformatics Lab

Improvements, bug fixes, and other changes were made by

Katelyn McNair Edwards Bioinformatics Lab and Przemyslaw Decewicz DEMB at the University of Warsaw