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  • Liftoff: an accurate tool that maps annotations in GFF or GTF between assemblies

Liftoff: an accurate tool that maps annotations in GFF or GTF between assemblies

https://github.com/agshumate/Liftoff

 Liftoff, an accurate tool that maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generated “chain” file as input, Liftoff is a standalone tool that takes two genome assemblies and a reference annotation as input and outputs an annotation of the target genome.