Bioinformatician uses servers for computational analysis. Sometime we need to check the server details before running our programs or tools. Here I am showing some basic commands using them you can gather the system/server information.To check what...
github.com - The Charm City Circleator--or Circleator for short--is a Perl-based visualization tool developed at the Institute for Genome Sciences in the University of Maryland's School of Medicine. Circleator produces circular plots of...
http://mojolicious.org/ - Back in the early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It was simple enough to get started without knowing much about the language and powerful enough to keep you going, learning by doing was...
Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research. The center combines frontline technical expertise with advanced knowledge of translational medicine and...
To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]. Here's a step-by-step guide:
Install RepeatMasker: First, you need to install RepeatMasker on your system. You...
The focus of the bioinformatics group is to use computational approaches to gain an insight into genome evolution in primates.
http://www.eva.mpg.de/genetics/bioinformatics/overview.html?Fsize=0%2C%20%40%2F%27
Kelso Group
Department of...
tjstein/php5-fpm-munin-plugins - A set of Munin plugins for PHP5-FPM
perusio/nginx-munin - A set of plugins for monitoring nginx with Munin
openresty/lua-resty-memcached - Lua memcached client driver for the ngx_lua based on the...
doua.prabi.fr - One code to find them all is a set of perl scripts to extract useful information from RepeatMasker about transposable elements, retrieve their sequences and get some quantitative information.
Assemble RepeatMasker hits into complete TE copies,...