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Using Interval Trees to Query Genome Annotations by Position

Using Interval Trees to Query Genome Annotations by Position

Using Interval Trees to Query Genome Annotations by Position

Last updated 3751 days ago by Rahul Agarwal

To work on query related to overlapping genomic features: use IntervalTree python pkg

http://informatics.malariagen.net/2011/07/07/using-interval-trees-to-query-genome-annotations-by-position/

http://hackmap.blogspot.de/2008/11/python-interval-tree.html

http://en.wikipedia.org/wiki/Interval_tree#Construction

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