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merqury: Evaluate genome assemblies with k-mers
By Jit 2171 days agogithub.com - Often, genome assembly projects have illumina whole genome sequencing reads available for the assembled individual. The k-mer spectrum of this read set can be used for independently evaluating assembly quality without the need of a high quality...InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
By Jit 1866 days agogithub.com - InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific...Internship Program for Bioinformatics / Biotechnology / MBA / MCA (No. Of Vacancy: 5)
ArrayGen is offering an Internship Program for Post graduate Bioinformatics / Biotechnology / MBA / MCA students and professionals. ArrayGen Technologies provide an excellent opportunity to gain research experience and explore if a scientific career...Understanding kmer !
By BioStar 1761 days agobioinfologics.github.io - What is a k-mer anyway? A k-mer is just a sequence of k characters in a string (or nucleotides in a DNA sequence). Now, it is important to remember that to get all k-mers from a sequence you need to get...irishgrid: Irish Grid Mapping System
By Jit 4188 days agocode.google.com - Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGrid includes: native support of the Irish Grid System (see...ncbi-datasets-cli -- Quickstart: command line tools !
By Jit 1650 days ago Comments (1)www.ncbi.nlm.nih.gov - Install and use the NCBI Datasets command line tools The NCBI Datasets datasets command line tools are datasets and dataformat . Use datasets to download biological sequence data across all domains of life from...Teaching Assistant at SVIMS
Eligible candidates are invited for a walk-in-interview for recruitment of Teaching Assistant in the Department of Bioinformatics on 8.08.2015 at 10 A.M. in the Committee Hall, SVIMS, Tirupati. The candidates have to attend with all original...PLAR: Pipeline for lncRNA annotation from RNA-seq data
By Abhi 1619 days agowww.weizmann.ac.il - Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and synteny). One is comparing human GENCODE genes (from GENCODE v30) to lncRNAs...
BINC examination 2015 !!!
By Jitendra Narayan 4185 days ago Comments (1)Registration for BINC examination 2015 will open soon.
