Neel
Bioinformatics Beginner
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Ancient whole genome duplication (WGD) detection tools !
By Rahul Nayak 1405 days agoThere are two methods for ancient WGD detection, one is collinearity analysis, and the other is based on the Ks distribution map. Among them, Ks is defined as the average number of synonymous substitutions at each synonymous site, and there is...ICGEB Bioinformatics RA/SRF/JRF Vacancies
Research Associate/JRF/SRF position, DBT Sponsored Bioinformatics Infrastructure Facility Applicants should hold a PhD or a first class MSc/MTech degree in Bioinformatics of Biotechnology/Life Sciences; experience in using bioinformatics tools,...Calling variants in non-diploid systems
By Neel 1294 days ago Comments (1)training.galaxyproject.org - The main challenge associated with non-diploid variant calling is the difficulty in distinguishing between the sequencing noise (abundant in all NGS platforms) and true low frequency variants. Some of the early attempts to do this well have been...NIAB Molecular Biology/Bioinformatics Scientist/RA Openings
D. No. 1-121/1, 4th and 5th Floors, Axis Clinicals Building, Miyapur, Hyderabad, Telangana, India- 500 049 Email: admin@niab.org.in Telephones: +91 40 2304 9403 Telefax: +91 40 2304 2740 Advertisement No: 5/2014 About NIAB National Institute...MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
By Neel 1137 days agogithub.com - MitoZ, consisting of independent modules of de novo assembly, findMitoScaf (find Mitochondrial Scaffolds), annotation and visualization, that can generate mitogenome assembly together with annotation and visualization results from HTS raw...BIC-PGI Bioinformatics Project Dissertation Program
Biomedical Informatics Centre, PGIMER, Chandigarh invites application for a project dissertation program for students who have completed their first year of M.Sc. in Bioinformatics. This is an exciting opportunity for Master's students to train...
Short-read assembly using Spades !
Last updated 1075 days ago by Abhimanyu Singh Comments (2)If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the same Illumina data as we used above: illumina_R1.fastq.gz: the Illumina...MIT Computational Biology Group
My research group consists primarily of computer science graduate students and postdocs with expertise in algorithms, statistical inferences and machine learning, and sharing a passion for understanding fundamental biological problems. We work in...Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
By Neel 1050 days agogithub.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...Bioinformatics Scientist at ICAR Labs
AGRICUL AGRICULTURAL SCIENTISTS RECRUITMENT BOARD TURAL SCIENTISTS RECRUITMENT BOARD KRISHI ANUSANDHAN BHAVAN-I, PUSA, NEW DELHI-110 012 ADVERTISEMENT NO. 03/2014 PRINCIPAL SCIENTIST Pay Band: Minimum pay of `43,000 in the PB-4 of...
