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Modular, efficient and constant-memory single-cell RNA-seq preprocessing
By Jit 1800 days ago Comments (1)pachterlab.github.io - With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Quantify data from numerous technologies such as...New RNA Seq tool
By Rahul Agarwal 4337 days ago Comments (4)www.genengnews.com - "By removing the time-consuming step of read mapping, the authors reported, Sailfish able to provide quantification estimates 20–30 times faster than current methods without loss of accuracy." Tool...Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
By Yeshodari 3061 days agowww.strand-ngs.com - Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLANDO, USA, Oct 17, 2017/ PRNewswire/ Strand NGS now supports large scale RNA- and small-RNA-Seq and Unique Molecular Identifiers (UMIs) for DNA-, RNA-, and...StringTie Transcript assembly and quantification for RNA-Seq
By Jit 2101 days agoccb.jhu.edu - StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow algorithm as well as an optional de novo assembly step to assemble and quantitate full-length...Kallisto vs Salmon: Choosing the Right Tool for RNA-Seq Quantification
By BioStar 313 days agoIn the world of transcriptomics, quantifying gene and transcript expression accurately and efficiently is crucial. With the explosion of RNA-Seq data, researchers have turned to fast, alignment-free tools that streamline the quantification process...transrate: Understanding your transcriptome assembly
By Neel 2797 days agohibberdlab.com - Transrate is software for de-novo transcriptome assembly quality analysis. It examines your assembly in detail and compares it to experimental evidence such as the sequencing reads, reporting quality scores for contigs and assemblies. This...Project Fellow Positions at CSIR-IHBT Palampur
Category: opportunity:Jobs
Salary: Rs.12,000/- P.M. Rs.14,000/- P.M. as per the funds provisions in the respective projects.
Condition: New
By Nitesh 3753 days agoWalk-in-Interview is scheduled to be held on the date as mentioned below for selection of Suitable candidates in the following areas under the different Sponsored/CSIR Networked Projects on purely temporary basis for the duration of the project(s)...JRF Bioinformatics at National Chemical Laboratory
Junior Project Fellow Bioinformatics Eligibility : ME/M.Tech, MSc(Bio-Informatics) Location : Pune Last Date : 08 Jan 2016 Hiring Process : Written-test, Face to Face Interview National Chemical Laboratory Junior Project Fellow Jobs...PostDoc at IISER -TVM
Postdoctoral Fellowship/ Research Associateship Eligibility : M Phil / Phd Location : Thiruvananthapuram Last Date : 30 Apr 2016 Hiring Process : Face to Face Interview IISER -TVM The Postdoctoral Fellowship/Research Associateship...flo
By Jitendra Narayan 3681 days agogithub.com - flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to another. Usually lift over is done because there is a new, improved genome assembly for the species and good quality...
