Rahul Agarwal
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BlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive...
By Jit 3063 days agobix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...Biinformamatics Lead at Google Life Sciences
Google Life Sciences is recruiting a technical lead with experience in bioinformatics and clinical bioinformatics, including for biomarker discovery projects such as the Baseline study. Responsibilities Lead teams of scientists in structuring,...ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole...
By Rahul Nayak 3022 days agogithub.com - ChopStitch is a new method for finding putative exons and constructing splice graphs using an assembled transcriptome and whole genome shotgun sequencing (WGSS) data. ChopStitch identifies exon-exon boundaries in de novo assembled RNA-seq data with...Faculty Positions at CENTRAL UNIVERSITY OF PUNJAB, BATHINDA
Advertisement No. T/NT-01 (2014) Faculty Positions The Central University of Punjab (CUP), Bathinda will be having the Schools and Departments as given in Table-I. The University invites applications from eligible candidates for the posts of...PureCN: copy number calling and SNV classification using targeted short read sequencing
By Jit 2985 days agobioconductor.org - This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by somatic status and clonality. PureCN is designed for targeted short read sequencing data, integrates well with...JRF in Bioinformatics @ Bioinformatics Centre, North-Eastern Hill University
Applications with complete bio-data are invited for JRF (3) and Project Assistant (1) in a DBT project "Next Generation Sequencing (NGS)-based de novo assembly of expressed transcripts and genome information of Orchids in North-East India"...LoRMA: A tool for correcting sequencing errors in long reads
By Abhimanyu Singh 2957 days agogite.lirmm.fr - An error correction method that uses long reads only. The method consists of two phases: first, we use an iterative alignment-free correction method based on de Bruijn graphs with increasing length of k-mers, and second, the corrected reads are...dcGOR
By Martin Jones 4355 days agoan R package for analysing ontologies and protein domain annotationsVariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
By Rahul Nayak 2929 days agogithub.com - VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store...ICGEB Bioinformatics RA/SRF/JRF Vacancies
Research Associate/JRF/SRF position, DBT Sponsored Bioinformatics Infrastructure Facility Applicants should hold a PhD or a first class MSc/MTech degree in Bioinformatics of Biotechnology/Life Sciences; experience in using bioinformatics tools,...
