Priya Singh
A Bioinformatician !!!
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GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
By Jit 2774 days agogithub.com - GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.htmlFeatures Mapping position agnostic to alignment parameters. ...Professor and Associate Professors (PB-IV) Assistant Professors (PB-III) Job at IIIT, Allahabad
Indian Institute of Information Technology, Allahabad Devghat, Jhalwa, Allahabad – 211012, Uttar Pradesh, India E-mail: contact@iiita.ac.in, faculty.applications@iiita.ac.in Web: www.iiita.ac.in Phone : 0532-2922031/27/67 Applications are...Reference-free prediction of rearrangement breakpoint reads
By Neel 2500 days agocode.google.com - lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of the number of neighboring reads. When applied to a dataset with a sequencing...
Find certain files/documents in Linux OS
Last updated 3931 days ago by Rahul NayakAs bioinformatician I know the fact that we usually handle the large dataset and lost in the huge numbers of files and folders. In order to search the missing file a strong search command is required. The Linux Find Command is one of the most...Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 2431 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...Raghava's Group
Raghava's group is known for developing open source software or web servers. Group have developed large number of web-based services. Find more at http://www.imtech.res.in/raghava/P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
By Jit 2404 days agowww.fishbrowser.org - P_RNA_scaffolder, a fast and accurate tool using paired-end RNA-sequencing reads to scaffold genomes. This tool aims to improve the completeness of both protein-coding and non-coding genes. After this tool was applied to scaffolding human contigs,...Assistant Professor at SARDAR PATEL UNIVERSITY
SARDAR PATEL UNIVERSITY Centre for Interdisciplinary Studies in Science and Technology No.: SPU/CISST/Advt./2014-15/519 ADVERTISEMENT for Teaching Positions (Contractual) Applications for the following Contractual Teaching Position are...Bioinformatics Protocols
By Rahul Nayak 3902 days agogenome.edu.au - RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012) Nature Protocols In this tutorial we cover the concepts of RNA-Seq differential gene expression (DGE) analysis using a very small synthetic dataset from a well...LRCstats: a tool for evaluating long reads correction methods
By Aaryan Lokwani 2332 days agogithub.com - LRCstats is an open-source pipeline for benchmarking DNA long read correction algorithms for long reads outputted by third generation sequencing technology such as machines produced by Pacific Biosciences. The reads produced by third generation...
