BOL

github.com - Scallop is an accurate reference-based transcript assembler. Scallop features its high accuracy in assembling multi-exon transcripts as well as lowly expressed transcripts. Scallop achieves this improvement through a novel algorithm that can be...

Department of Preventive and Social Medicine , JIPMER, Puducherry –605006 WALK-IN INTERVIEW JIP/PSM/INDO-US TB/ 2016/ Walk-in-interview for the following vacant posts funded by Department of Biotechnology, Govt.of India for the project...

ftp.genomics.org.cn - RePS (Repeat-masked Phrap with scaffolding), a WGS sequence assembler, that explicitly identifies exact kmer repeats from the shotgun data and removes them prior to the assembly. The established software Phrap is used to compute meaningful error...

Advt. No.: Maths./577/2016 Date: 12/08/2016 JRF Bioinformatics Job Position in Maulana Azad National Institute of Technology (MANIT) purely temporary basis Project Title : “Computational Approach to Study Complex Biological Network of Diseases...

omega.omicsbio.org - Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...

Advt. No. NABI/8(18)/2012-PME-3 Project Scientist recruitment in National Agri-Food Biotechnology Institute (NABI) Project Title : “Transfer and Evaluation of Indian Banana with Pro-Vitamin A (PVA) Constructs” Essential qualifications: Ph.D....

github.com - A de novo genome assembly can be summarised b y a number of metrics, including: Overall assembly length Number of scaffolds/contigs Length of longest scaffold/contig Scaffold/contig N50 and N90Assembly base composition, in...

Traineeship/Studentship cunducts University of Delhi (Gargi College) on purely temporary for a period of six months. Traineeship — 01 (one post) Essential Qualification: Post Graduate degree in Bioinformatics or any other branch of Life Sciences...

github.com - HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence reads, designed to "just work" with excellent speed and accuracy. We found that previously described haplotype assembly methods are specialized for specific read...

wishart.biology.ualberta.ca - GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or as a visualization tool in a sequence annotation pipeline. Users can interact...