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Open Positions in Pasini’s lab
Computational Biologists Open to PhD-student and Post-doc candidates We are looking for wet and computational biologists to work on an ERC funded project in our laboratory located at the Department of Experimental Oncology of the European...Important Journals, Blogs and Forums for Bioinformaticians
By Jit 2995 days ago Comments (41)Journals, Blogs and Forums for BioinformaticiansJRF Bioinformatics job vacancies in Tezpur University
Memo No. DoRD/CSE/SSS/20-295/112-A Date: 01/02/2017 Project Title : Integrating genome scale metabolic analysis of model plant pathogen Ralstonia solanacearum with RNAseq and fluxomics Essential qualification : M.Tech. in CSE/IT (With...BRIG
By Jit 2987 days agobrig.sourceforge.net - BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The application is available...bedtools
By Jit 2979 days agobedtools.readthedocs.io - Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome arithmetic: that is, set theory on the genome. For...AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references
By Manisha Mishra 2562 days agogithub.com - AlignGraph is a software that extends and joins contigs or scaffolds by reassembling them with help provided by a reference genome of a closely related organism. Using AlignGraph AlignGraph --read1 reads_1.fa --read2 reads_2.fa --contig contigs.fa...FinisherSC: a repeat-aware and scalable tool for upgrading de novo assembly using long reads
By Jit 2976 days agokakitone.github.io - FinisherSC, a repeat-aware and scalable tool for upgrading de novo assembly using long reads. Experiments with real data suggest that FinisherSC can provide longer and higher quality contigs than existing tools while maintaining high...Hercules: a profile HMM-based hybrid error correction algorithm for long reads
By Jit 2437 days agogithub.com - Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and read length. Several studies require long and accurate reads including de novo assembly, fusion and structural variation detection....Bioinformatics walk-in-interview at Tezpur University
A walk-in-interview will be held on 09 March, 2017, 11.15 a.m. at the office of the Head, Department of Computer Science and Engineering, Tezpur University for one (01) temporary position of Junior Research Fellow (JRF) in the DBT, Govt. of India...HDOCK SERVER
By Neel 1771 days agohdock.phys.hust.edu.cn - HDOCK SERVER Protein-protein and protein-DNA/RNA docking based on a hybrid algorithm of template-based modeling and ab initio free docking. The HDOCK server distinguishes itself from similar docking servers in its ability to support...
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