Jit
Enthusiast computational biologist with business dream !!!
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Important Journals, Blogs and Forums for Bioinformaticians
By Jit 2845 days ago Comments (41)
Journals. Most journals have RSS feeds for their current updates.
- Bioinformatics - RSS feed of current and advance online publications
- Genome Research - current & advance
- Genome Biology - editors picks, latest, most viewed, most forwarded. (Hit the RSS icon under each tab).
- PLoS Genetics - new articles
- PLoS Computational Biology - new articles
- Nature Genetics - current TOC and AOP
- Nature Reviews Genetics - current TOC and AOP
- Bioinformatics
- BMC Bioinformatics
- Briefings in Bioinformatics
- Genome Biology
- Genome Research: current and AOP
- Microbiome
- Nature Genetics, current & AOP
- Nature Reviews Genetics, current & AOP
- Nucleic Acids Research
- PLOS Computational Biology
- PLOS Genetics
Blogs. Some of these blogs are very relevant to bioinfo jobs. Others are more personal interest.
- The OpenHelix Blog
- Ensembl blog
- Galaxy News
- Blue Collar Bioinformatics
- Homologus
- Golden Helix - our 2 SNPs
- Genomics Law Report
- R-bloggers (aggregates feeds from >350 blogs about R)
- Genomes Unzipped
- Jason Moore's Epistasis Blog
- 23andMe - the Spitoon
- Variance Explained: David Robinson’s blog (Data Scientist at Stack Overflow, works in R and Python).
- Global Biodefense: News on pathogens, outbreaks, and preparedness, with periodic posts on genomics and bioinformatics-related developments and funding opportunities.
- In between lines of code: Lex Nederbragt’s blog on biology, sequencing, bioinformatics, …
- Simply Statistics: A statistics blog by Rafa Irizarry, Roger Peng, and Jeff Leek.
- Bits of DNA: Reviews and commentary on computational biology by Lior Pachter (fair warning: dialogue here can get a bit heated!).
- Blue Collar Bioinformatics: articles related tool validation and the open source bioinformatics community.
- Microbiome Digest – Bik’s Picks: A daily digest of scientific microbiome papers, by Elisabeth Bik, Science Editor at uBiome.
- Living in an Ivory Basement: Titus Brown’s blog on metagenomics, open science, testing, reproducibility, and programming.
- Enseqlopedia: James Hadfield’s blog on all things NGS.
- Epistasis Blog: Jason Moore’s computational biology blog.
- RStudio Blog: announcements about new RStudio functionality, updates about the tidyverse, and more.
- nextgenseek.com: Next-Gen Sequencing Blog covering new developments in NGS data & analysis.
- RNA-Seq Blog: Transcriptome Research & Industry News.
- The Allium: We all need a little humor in our lives. Like The Onion, but for science.
Forums.
Comments
Molecular Phylogenetics and Evolution https://www.journals.elsevier.com/molecular-phylogenetics-and-evolution accept bioinformatics pipeline. Impact 4.4
Bioinformatics tools can also be accepted by "Animal Genetics" journal http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1365-2052
I found this journal today http://www.springer.com/life+sciences/systems+biology+and+bioinformatics/journal/12539
PeerJ also accept bioinformatics papers https://peerj.com
My collection of biology journals
Nature
Nature Genetics
Nature Medicine
Nature Biotechnology
Nature Reviews Genetics
Nature methods
Nature Communications
Bioinformatics
PLoS Computational Biology
Briefings in Bioinformatics
Briefings in Functional Genomics
BMC Bioinformatics
BMC Genomics
BMC Cancer
Genome Biology
Genome Research
Nucleic Acids Research
Science
New England Journal of Medicine (NEJM)
The Lancet
elife
EBiomedicine
Genes and development
PNAS
Blood
Cell
JAMA: The Journal of the American Medical Association
Plos One
Plos Medicine
Journal of Clinical Investigation (JCI)
Journal of Biological Chemistry
Cancer Research
Oncogene
Human Mutation
Clinical Cancer Research
Pigment Cell & Melanoma Research
BMC Biology
Oncotarget
Proteins: Structure, Function, and Bioinformatics
Genomics, Proteomics & Bioinformatics
Pharmacogenetics and Genomics
Nature protocol
Pharmacogenomics
Mammalian Genome
Genomics
Cancer Informatics
Scientific Reports
Computers in Biology and Medicine
International Journal of Functional Informatics and Personalised Medicine
Source Code for Biology and Medicine
Functional Genomics, Genetics, and Bioinformatics
Advances in Bioinformatics
BioData Mining
BMC Systems Biology
Bioinformation
Genome Announcements
BMC Genetics
BMC Medical Genetics
BMC Medical Genomics
Clinical Epigenetics
Epigenetics & Chromatin
Informative bioinformatics bloggers
Diving into Genetics and Genomics
YOKOFAKUN
Getting Genetics Done
Gigabase or gigabyte
Genome Spot
CoreGenomics
The Genome Factory
RajLab
Omics! Omics!
Next-Gen Sequencing
Blasted Bioinformatics!?
Mike Love’s blog
genetics for fun
Blue Collar Bioinformatics
Bioinformatics Bits and Pieces
Bits of DNA
Bioinformatics Zen
MassGenomics
Kevin’s GATTACA World
Genomes Unzipped
Xiaole Shirley Liu’s Blog Site
Variable Genome
Genomics, ETC.
Bioinformatics I/O
Methods journals also accept bioinformatics papers https://www.journals.elsevier.com/methods
Chromosoma journal for chromosome and nucleus https://link.springer.com/journal/412
Bioinformatics tools are also accepted in "toxins" journals http://www.mdpi.com/journal/toxins
Bioinformatics Research and Applications https://link.springer.com/book/10.1007/978-3-642-38036-5
Publish bioinformatics tools
Nice blog at http://bioinformatics.cvr.ac.uk/blog/
Useful bioinformatics blog pages
123Bioinformatics
http://www.123bioinformatics.com
Binfalse - Bioinformatics and System Administration
http://binfalse.de/
Bioinformatics Zen
http://www.bioinformaticszen.com/
Bioinformaticsclub
http://bioinformaticsclub.blogspot.com
BioTools
http://bio-tools.org
Flags and Lollipops
http://www.ghastlyfop.com/blog/
Macromolecular Modeling Blog
http://rosettadesigngroup.com/blog/
Nuevo Blog de BioInformatica Ecuador
http://bioinformatica-ec.blogspot.com/
Perfect marriage of bimatics and computation-bioinformatics
http://bioalma.blogspot.com
Steve's Systems Biology blog
http://www.stevecheckley.co.uk/blog/
The Computational Life
http://www.computationallife.blogspot.com
YOKOFAKUN
http://plindenbaum.blogspot.com/
Computers in Biology and Medicine https://www.journals.elsevier.com/computers-in-biology-and-medicine
The Open Bioinformatics Journal https://www.benthamopen.com/TOBIOIJ/
#Note impact factor ~4 ... ???
Bioinformatics analysis could be published in The Nucleus https://link.springer.com/journal/13237
Nucleus journal accept bioinformatics tool and software papers https://www.springer.com/life+sciences/cell+biology/journal/13237
Cells accept bioinformatics papers https://www.mdpi.com/journal/cells/special_issues/bioinformatics_cells
Application in plant sciences accept tools and software https://bsapubs.onlinelibrary.wiley.com/journal/21680450
Genomics, Proteomics & Bioinformatics https://www.journals.elsevier.com/genomics-proteomics-and-bioinformatics
NAR: Genomics and Bioinformatics publishes high quality research into genomics and bioinformatics, including novel computational or experimental methods and novel biological findings related to genomics, proteomics, transcriptomics, and epigenetics.
https://academic.oup.com/nargab
Bioinformatics Journals Ranks from Google Scholar
1: Bioinformatics Journals (the most recent Impact Factor :: 5-year Impact Factor)
2: Other journals that publish bioinformatics papers
3: Low-cost or no-cost journals
cell-systems journal also accept tools papers
https://www.cell.com/cell-systems/home
Tools publication at BMC Research Notes
The Journal of Logic and Computation accept bioinformatics algorithms ans methods papers.
https://academic.oup.com/logcom
Bioinformatics journals list on springer https://link.springer.com/search/page/1?facet-subject=%22Bioinformatics%22&facet-content-type=%22Journal%22