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Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 2429 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...DbBrowser: Attwood Lab
DbBrowser: Attwood Lab research concerns protein sequence analysis, primarily using the method of protein 'fingerprinting'. DbBrowser: Attwood Lab maintain a diagnostic fingerprint database (PRINTS), one of the founding partner of InterPro. We also...PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++.
By Surabhi Chaudhary 2402 days agoderisilab.ucsf.edu - We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively...Bioinformatics @ TATA MEMORIAL CENTRE, NAVI MUMBAI
TATA MEMORIAL CENTRE ADVANCED CENTRE FOR TREATMENT, RESEARCH AND EDUCATION IN CANCER KHARGHAR, NAVI MUMBAI – 410210 No. ACTREC/Advt./ 72 /2013 WALK IN INTERVIEW 1. JRF* Genome-wide RNAi screen with human pooled tyrosine kinase shRNA...Project Junior Research Fellow @ CCMB
Temporary Project positions available purely on temporary basis - Oct/2013 1. Project Junior Research Fellow / Project Assistant Last Date: 11th Nov 2013 Qualification B.Tech (Comp. Sci.), B.Tech/M.Tech (Bioinformatics), MCA, M.Sc....Edwards Lab
We study the evolutionary biology of birds and relatives, combining field, museum and genomics approaches to understand the basis of avian diversity, evolution and behavior. Our guiding approaches include population genetics, which provides a...GFinisher: a new strategy to refine and finish bacterial genome assemblies
By Jit 2357 days agogfinisher.sourceforge.net - GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaffolds with genomes references. java -Xms2G -Xmx4G -jar...Ai-CADD Project @ Kerela University
Applications are invited for the following Positions in the AiCADD project funded by MHRD Govt of India Last Date for Submitting Application: 25th November 2013 1. Senior Scientist: (01 position) Pay Scale: Rs.40, 000/- Qualifications: PhD/...Scientist-B @ VECTOR CONTROL RESEARCH CENTRE
VECTOR CONTROL RESEARCH CENTRE (Indian Council of Medical Research) Indira Nagar Medical Complex Puducherry-605006 WALK-IN-INTERVIEW The following vacancies shall be filled purely on adhoc basis under Non-Institutional adhoc project...MITOS: improved de novo metazoan mitochondrial genome annotation
By Jit 2265 days agomitos.bioinf.uni-leipzig.de - Allows automatic annotation of metazoan mitochondrial genomes. MITOS is a pipeline designed to compute a consistent de novo annotation of the mitogenomic sequences. The software allows for a systematic error screening, the standardisation of gene...
