Jit
Enthusiast computational biologist with business dream !!!
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Project Fellow at IHBT - Palampur, Himachal Pradesh
The Institute is working relentlessly on developing technologies for sustainable utilization of Himalayan bioresources, and in the area of tea, floriculture, bamboos and medicinal and aromatic plants. Looking at the mission of the Institute,the...BASE: a practical de novo assembler for large genomes using long NGS reads
By Rahul Nayak 2794 days agogithub.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...Assistant Professor/ Professor at Central University of South Bihar
Central University of South Bihar (Established under Central Universities Act, 2009) BIT Campus, PO: B.V. College, Patna – 800 014 (Bihar) Employment Notice No. CUSB / 27 / Faculty / 2015 Appointment for Faculty Positions Applications...nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2690 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...JRF in Bioinformatics @ Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram
Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram Job Code: 060815(10)Y Jr Research Fellow Posts At Rajiv Gandhi Centre for Biotechnology Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications to recruit on vacant...ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 2339 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...Senior Research Fellow (SRF) Bioinformatics at AIIMS, India
DEPARTMENT OF BIOTECHNOLOGY ALL INDIA INSTITUTE OF MEDICAL SCIENCES NEW DELHI-110029 Requirement of Senior Research Fellow Applications are invited for the following vacancy under Research project entitled “Exploiting temporal transcription...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 2307 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...Bioinformatics Symposium
This 2 day symposium will focus on topics in the below mentioned areas. Experts from India and Japan in this fields will deliver lectures and contribute in discussions. This will provide an opportunity to the participants to interact and...FiNGS: Filters for Next Generation Sequencing
By Neel 1932 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...
