github.com - Filtlong is a tool for filtering long reads by quality. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the...
pevsnerlab.kennedykrieger.org - DRAGON: Database Referencing of Array Genes Online
SNOMAD: Standardization and Normalization of Microarray Data
SNPduo: SNP Analysis Between Two Individuals
SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios
SNPscan: Data...
github.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...
CSIR - Institute of Himalayan Bioresource Technology 2 vacancies of Project Fellow
Name of the Post: Project Fellow
No. of the Post: 02 Two
Salary: Rs. 12000/- per month or Rs. 14000/- per month
Age Limit: Max. 28 years as on 10.06.2015...
github.com - AlignGraph2 is the second version of AlignGraph for PacBio long reads. It extends and refines contigs assembled from the long reads with a published genome similar to the sequencing genome.
More...
As the cost of DNA sequencing has dropped, the volume of data produced has risen into the petabytes. Google is working with the genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud...
If we only had Illumina reads, we could also assemble these using the tool Spades.
You can try this here, or try it later on your own data.
Get data
We will use the same Illumina data as we used above:
illumina_R1.fastq.gz: the Illumina...
Applications for Pre-selection of candidates under ‘Institutions Mode’ for DST-ISPIRE Faculty in Computational Biology/ Systems Biology/ Bioinformatics
Applications are invited for pre-selection of candidates for Ministry of Science and...
github.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...
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