Jit
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Ribbon: Visualizing complex genome alignments and structural variation:
By Jit 2584 days agohttp://genomeribbon.com/ - Ribbon can be used for long reads, short reads, paired-end reads, and assembly/genome alignments. Instructions for each data format are available by clicking on "instructions" in each tab on the right. Local installation: You can install Ribbon...Troyanskaya Lab
In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...Mugsy: multiple whole genome alignment tool
By Jit 2574 days ago Comments (1)mugsy.sourceforge.net - Mugsy is a multiple whole genome aligner. Mugsy uses Nucmer for pairwise alignment, a custom graph based segmentation procedure for identifying collinear regions, and the segment-based progressive multiple alignment strategy from Seqan::TCoffee....Assistant Professor in Molecular Synthesis for Drug Discovery and Development @ CBMR, Lucknow
ADVERTISEMENT FOR FACULTY POSITIONS AT CENTRE OF BIOMEDICAL RESEARCH (CBMR), LUCKNOW Details of the Positions and Pay Structure: 03 Posts for Assistant Professor in Molecular Synthesis for Drug Discovery and Development Essential...AliTV—interactive visualization of whole genome comparisons
By Jit 2542 days agogithub.com - AliTV, which provides interactive visualization of whole genome alignments. AliTV reads multiple whole genome alignments or automatically generates alignments from the provided data. Optional feature annotations and phylo- genetic information are...Junior Bioinformatic position
Junior Bioinformatic position in the laboratory of Inflammation and immunology in cardiovascular pathologies at Humanitas: We are seeking a highly motivated young PhD student with strong interest in high throughput data analysis. Detailed...ARCS: scaffolding genome drafts with linked reads
By Rahul Nayak 2486 days agogithub.com - ARCS, an application that utilizes the barcoding information contained in linked reads to further organize draft genomes into highly contiguous assemblies. We show how the contiguity of an ABySS H.sapiensgenome assembly can be increased over...Project Fellow @ National Institute of Malaria Research
National Institute of Malaria Research Sector 8, Dwarka, Delhi -110077 WALK IN INTERVIEW One position of project fellow is to be filled up in a DRL- funded research project on Molecular and morphological characterization of An. fluviatilis...MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads
By Rahul Nayak 2421 days agogithub.com - MECAT is an ultra-fast Mapping, Error Correction and de novo Assembly Tools for single molecula sequencing (SMRT) reads. MECAT employs novel alignment and error correction algorithms that are much more efficient than the state of art of aligners and...The Graveley Lab
Research in the Graveley lab is primarily focused on the regulation of alternative splicing and small RNA mediated gene regulation. These are fascinating and extraordinarily important mechanisms by which genes can be regulated. Our long-term goals...
