bioinformatics.oxfordjournals.org - The genome sequencing revolution is approaching a landmark figure of 1000 completely sequenced genomes. Coupled with fast-declining, per-base sequencing costs, this influx of DNA sequence data has encouraged laboratory scientists to engage large...
github.com - The goal of the Shasta long read assembler is to rapidly produce accurate assembled sequence using as input DNA reads generated by Oxford Nanopore flow cells.
Computational methods used by the Shasta assembler include:
Using...
PONDICHERRY UNIVERSITY
CENTRE FOR BIOINFORMATICS
PUDUCHERRY
Applications are invited for one Project Assistant to work in the UGC sponsored Research Award "Molecular Docking and Dynamics studies to understand the interacting mechanism of...
github.com - genome simulation across a population with zeta-distributed allele frequency, snps, insertions, deletions, and multi-nucleotide polymorphisms
More at https://github.com/ekg/mutatrix
./mutatrix -S sample -P test/ -p 2 -n 10 reference.fasta
OPENINGS OF FACULTY POSITIONS AT IIIT-ALLAHABAD
(Under Tenure-Track Model)
Open Advt. No IIITA/DIC/16012014
IIIT-Allahabad has several Openings for the Faculty positions at the Assistant Professor level.
It is a regular tenure-track...
wego.genomics.org.cn - WEGO (Web Gene Ontology Annotation Plot) is a simple but useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results. As the GO vocabulary became more and more popular, WEGO was widely adopted and used in many...
Post-doctoral Research Assistant in Genetics
Camden, North London
£31.1K per annum inclusive of London Weighting
This is a fixed term post for 36 months.
We wish to recruit a highly motivated, postdoctoral scientist to carry out a BBSRC...
github.com - Create an interactive dot plot from mummer output OR PAF format
R script that makes a plotly interactive and/or static (png/pdf) dot plot.
Shiny app available for testing
Rajiv Gandhi Centre for Biotechnology
An Autonomous National Institute under Government of India,
Ministry of Science & Technology
Department of Biotechnology
No: RGCB/ Advt./2014/1
January 24, 2014
Scientist Positions
Group...
ivory.idyll.org - DNA k-mers underlie much of our assembly work, and we (along with many others!) have spent a lot of time thinking about how to store k-mer graphs efficiently, discard redundant data, and count them efficiently.
More recently, we've...