Jit
Enthusiast computational biologist with business dream !!!
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SRF/JRF Bioinformatics at IARI
Agricultural Knowledge Management Unit ICAR-INDIAN AGRICULTURAL RESEARCH INSTITUTE L.B.S Building, Pusa Campus, New Delhi-110012 Walk-in-Interview: 18th December 2015 DBT funded project: Distributed Information Centre under BTISnet...Cerulean: A hybrid assembly using high throughput short and long reads
By Rahul Nayak 2983 days agosourceforge.net - Cerulean extends contigs assembled using short read datasets like Illumina paired-end reads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented with bacterial genomes in mind. The method is fully described in...RA Bioinformatics at NIPGR
Applications are invited from suitable candidates for filling up the purely temporary positions of one Research Associate (RA) and one Junior Research Fellow (JRF) in the DBT Part-B Sub-project-1&2 entitled Transcriptome and epigenome diversity...Hercules: a profile HMM-based hybrid error correction algorithm for long reads
By Jit 2907 days agogithub.com - Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and read length. Several studies require long and accurate reads including de novo assembly, fusion and structural variation detection....Project Assistant BioInformatics
Project Assistant BioInformatics Eligibility : ME/M.Tech(Bio-Informatics/Bio-Chemistry Engg), MSc(Bio-Informatics), BE/B.Tech Location : Pune Last Date : 16 Nov 2015 Hiring Process : Face to Face Interview No. Bio/NCIM/3...Rebaler: program for conducting reference-based assemblies using long reads.
By Jit 2878 days agogithub.com - Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences. I made Rebaler for bacterial genomes (specifically for the...Pre- or postdoctoral research fellowship in Structural Bioinformatics at Padova
A research fellowship for a software developer is available at the BioComputing UP Laboratory, University of Padova (URL: http://protein.bio.unipd.it/). A highly motivated and creative candidate is sought to work on structural bioinformatics....Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Neel 2809 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful...NextDenovo: string graph-based de novo assembler for TGS long reads
By Jit 2405 days agogithub.com - NextDenovo is a string graph-based de novo assembler for TGS long reads. It uses a "correct-then-assemble" strategy similar to canu, but requires significantly less computing resources and storages. After assembly, the per-base error rate...Traineeship at Biomedical Informatics Centre PGIMER Chandigarh
Biomedical Informatics Centre PGIMER Chandigarh invites application for a project dissertation program for students who have completed their first year of M.Sc. in Bioinformatics. This is an exciting opportunity for Master's students to...
