BOL

FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...

Rajiv Gandhi Centre for Biotechnology An Autonomous National Institute under Government of India, Ministry of Science & Technology Department of Biotechnology No: RGCB/ Advt./2014/1 January 24, 2014 Scientist Positions Group...

gwct.github.io - Modern genome sequencing technologies provide a succint measure of quality at each position in every read, however all of this information is lost in the assembly process. Referee summarizes the quality information from the reads that map to a site...

Param Bio Blaze, a supercomputing facility, to address the challenges in bioinformatics on Tuesday at a three-day symposium.

github.com - jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants...

DNA samples of living people infer the ancient biological relationship ...

github.com - Welcome to kevlar, software for predicting de novo genetic variants without mapping reads to a reference genome! kevlar's k-mer abundance based method calls single nucleotide variants (SNVs), multinucleotide variants (MNVs),...

We are looking for a motivated application scientist to help evaluate, compare, and develop next generation sequencing (NGS) data analysis methods. The successful candidate should be able to quickly understand the state-of-art computational biology...

github.com - A program to detect recombination hotspots using population genetic data. More at https://github.com/auton1/LDhot

The Roth Lab seeks insight into biological systems through genome- and proteome-scale experimentation and analysis. Current computational interests: Systematic analysis of genetic epistasis to identify redundant or compensatory systems and to...