Abhimanyu Singh
A bioinformatics beginner
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ChromHMM: Chromatin state discovery and characterization
By Abhimanyu Singh 2777 days agocompbio.mit.edu - ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial...SDA: Long-read sequence and assembly of segmental duplications
By Jit 2092 days agowww.nature.com - Segmental Duplication Assembler (SDA; https://github.com/mvollger/SDA) constructs graphs in which paralogous sequence variants define the nodes and long-read sequences provide attraction and repulsion edges, enabling the partition and assembly of...Mapping NGS
By Abhimanyu Singh 2764 days agowiki.bits.vib.be - NGS data are just a bunch of sequences, you have no idea which region in the genome each sequences comes from, which gene it represents...To know that you have to align the sequences to the reference sequence. The reference sequence is in most cases...CONTIGuator !
By BioStar 1879 days agosourceforge.net - CONTIGuator is a Python script for Linux environments whose purpose is to speed-up the bacterial genome assembly process and to obtain a first insight of the genome structure using the well-known artemis comparison tool (ACT).Ten International Scholarships for Indian Biotechnology and Bioinformatics Students
By Priya Singh 2756 days ago Comments (10)10 International Scholarships for Indian StudentsERGO 2.0 Bioinformatics suites
By Jit 2750 days agowww.igenbio.com - ERGO 2.0 provides a systems biology informatics toolkit centered on comparative genomics to capture, query, and visualize sequenced genomes. Using Igenbio's proprietary algorithms, and the most comprehensive genomic database integrated with...Senior Bioinformatics Software Developer, Hyderabad, Telangana
DuPont Pioneer is the world leader in plant biotechnology area including discovery, development and delivery of elite crop genetics. DuPont Pioneer is aggressively building Big Data and Predictive Analytics capabilities in order to deliver improved...The 10th North East Bioinformatics Network (NEBINet) Annual Coordinators' Meet
By Jit 2563 days agoThe 10th North East Bioinformatics Network (NEBINet) Annual Coordinators' Meet organised by the Bioinformatics Centre, St Edmund's College, Shillong and sponsored by the Department of Biotechnology, Government of India, was held at St Edmund's...Supernova: generates phased, whole-genome de novo assemblies from a Chromium-prepared library.
By Jit 1639 days agosupport.10xgenomics.com - Supernova generates phased, whole-genome de novo assemblies from a Chromium-prepared library. Please see Achieving Success with De Novo Assembly and System Requirements before creating your Chromium libraries for...Bioinformatics postdoctoral position at inStem
One postdoctoral position is available in the area of Bioinformatics. This position is available through a highly collaborative project involving multiple labs. The primary focus here would be to analyse and integrate high throughput data from...
