Jit
Enthusiast computational biologist with business dream !!!
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Biological databases !
By BioStar 1793 days ago Comments (4)ftp.ncbi.nih.gov - Now a days there are a lots of genomics databases available around the world. This bookmark is created to provide all links in one place ... ftp://ftp.ncbi.nih.gov/genomes/ https://hgdownload.soe.ucsc.edu/downloads.htmlJava utilities for Next Generation Sequencing by Pierre Lindenbaum
By Robert M Willioms 3768 days agogithub.com - Java utilities for Bioinformatics https://github.com/lindenb/jvarkitHASLR: a hybrid assembler which uses both second and third generation sequencing reads
By BioStar 1711 days agogithub.com - HASLR, a hybrid assembler which uses both second and third generation sequencing reads to efficiently generate accurate genome assemblies. Our experiments show that HASLR is not only the fastest assembler but also the one with the lowest number of...KAU Thrissur Biotech/Bioinformatics RA/SRF/JRF/Trainee/Studentships
Applications are invited from eligible candidates for the following posts at Bioinformatics Centre (DIC), IT- BT Complex, College of Horticulture, Kerala Agricultural University, Vellanikkara, Thrissur. 1. Research Associate Emoluments*:...mixtureS: a novel tool for bacterial strain reconstruction from reads
By BioStar 1602 days agowww.cs.ucf.edu - mixtureS that can de novo identify bacterial strains from shotgun reads of a clonal or metagenomic sample, without prior knowledge about the strains and their variations. Tested on 243 simulated datasets and 195 experimental datasets, mixtureS...FACULTY POSITION at NATIONAL INSTITUTE OF TECHNOLOGY, ROURKELA
NIT, Rourkela, an institute of national importance under Ministry of HRD, Govt. of India invites applications from Indian nationals possessing excellent academic background along with commitment to quality teaching and research for faculty positions...Software developed in pevsner lab
By Robert M Willioms 3748 days agopevsnerlab.kennedykrieger.org - DRAGON: Database Referencing of Array Genes Online SNOMAD: Standardization and Normalization of Microarray Data SNPduo: SNP Analysis Between Two Individuals SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios SNPscan: Data...HairSplitter: assembling long reads in an unknown number of haplotypes
By BioStar 764 days agohal.archives-ouvertes.fr - Pros and cons of HairSplitter Limitations of HairSplitter: Not very fast: it re-polishes the whole assembly Limited in the number of haplotypes Strengths of HairSplitter: Very modular, can be used with any assembler Naive: makes no...Research Fellows at CSIR - Institute of Himalayan Bioresource Technology, Palampur, Himachal...
CSIR - Institute of Himalayan Bioresource Technology 2 vacancies of Project Fellow Name of the Post: Project Fellow No. of the Post: 02 Two Salary: Rs. 12000/- per month or Rs. 14000/- per month Age Limit: Max. 28 years as on 10.06.2015...Meraculous: De Novo Genome Assembly with Short Paired-End Reads
By Jit 2620 days agowww.ncbi.nlm.nih.gov - We describe a new algorithm, meraculous, for whole genome assembly of deep paired-end short reads, and apply it to the assembly of a dataset of paired 75-bp Illumina reads derived from the 15.4 megabase genome of the haploid yeast Pichia...
