Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Related items
BlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive...
By Jit 2847 days agobix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...Important Journals, Blogs and Forums for Bioinformaticians
By Jit 3316 days ago Comments (41)Journals, Blogs and Forums for BioinformaticiansAnchorWave
By Neel 1475 days agogithub.com - AnchorWave (Anchored Wavefront Alignment) identifies collinear regions via conserved anchors (full-length CDS and full-length exon have been implemented currently) and breaks collinear regions into shorter fragments, i.e., anchor and inter-anchor...JRF Bioinformatics job vacancies in Tezpur University
Memo No. DoRD/CSE/SSS/20-295/112-A Date: 01/02/2017 Project Title : “Integrating genome scale metabolic analysis of model plant pathogen Ralstonia solanacearum with RNAseq and fluxomics” Essential qualification : M.Tech. in CSE/IT (With...MetaGraph: Ultra Scalable Framework for DNA Search, Alignment, Assembly
By Abhi 638 days agometagraph.ethz.ch - The MetaGraph framework is designed to work with a wide range of input data sets, indexing from a few samples up to the contents of entire archives with hundreds of thousands of records. The indexing workflow always follows the same principle,...CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
By Jit 3149 days agowebchem.ncbr.muni.cz - Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide sequences of different pieces of DNA. The Basic Local Alignment Search Tool (BLAST) has revolutionized...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2845 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
By Jit 2771 days agowww.healthcare.uiowa.edu - Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser...rHAT: a seed-and-extension-based noisy long read alignment tool
By Abhimanyu Singh 2724 days agogithub.com - rHAT is a seed-and-extension-based noisy long read alignment tool. It is suitable for aligning 3rd generation sequencing reads which are in large read length with relatively high error rate, especially Pacbio's Single Molecule Read-time (SMRT)...sequenceserver
By Jit 3286 days agogithub.com - SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use locally or over the web. More at http://sequenceserver.com.
