Jit
Enthusiast computational biologist with business dream !!!
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Powerful books for learning data analysis with R
By LEGE 747 days agohttps://r-graphics.org/ - R is powerful tool for data analysis, visualization, and machine learning. And it costs $0 to use! Here are six FREE books you can use to learn R...Venkatesh Lab
We are using a comparative genomics approach to better understand the structure, function and evolution of the human genome. Our group is one of the pioneers in the field of comparative genomics. We proposed the compact genome of the fugu (Takifugu...Comparison of Short Read De Novo Alignment Algorithms
By Rahul Agarwal 4680 days agobiochem218.stanford.edu - Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil GopalSRF Bioinformatics at JNU
School of Life Sciences Jawaharlal Nehru University New Delhi 110067 Positions available Applications were invited from for the following posts in an industry sponsored project. The project entitled "OsHK3b technology and Know How", valid...3d-dna: 3D de novo assembly (3D DNA) pipeline
By Jit 3090 days agogithub.com - This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reported in: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017. Unless otherwise...PhD program in Computer Science at University of Essex
As part of the PhD program in Computer Science at University of Essex, I am looking for a PhD student in computational and synthetic biology. The ideal candidate is interested in designing new biological design automation methods for genome scale...ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
By Seema Singh 2967 days agogithub.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper...MafTools
By Jit 3405 days agogithub.com - maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project...
