Abhimanyu Singh
A bioinformatics beginner
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By Jit 2821 days agohttp://ani.mypathogen.cn/ - ANItools is a software package written by PERL scripts that can be run in a Linux/Unix system. If you want to compare bacterial genomes and calculate their average nucleotide identity (ANI), you could download and run this program directly. Or you...Bioinformatics Algorithms (Part 1) with Pavel Pevzner, Phillip E. C. Compeau,
By Jitendra Narayan 4692 days ago Comments (2)The course Bioinformatics Algorithms (Part 1) by Pavel Pevzner, Phillip E. C. Compeau, and Nikolay Vyahhi from University of California, San Diego will be offered free of charge to everyone on the Coursera platform. Sign up at...Purge Haplotigs: Pipeline to help with curating heterozygous diploid genome assemblies
By Rahul Nayak 2789 days agobitbucket.org - Some parts of a genome may have a very high degree of heterozygosity. This causes contigs for both haplotypes of that part of the genome to be assembled as separate primary contigs, rather than as a contig and an associated haplotig. This can be an...Walk-in-Interview @ Indian Agricultural Statistics Research Institute
Indian Agricultural Statistics Research Institute Library Avenue, Pusa, New Delhi – 110012 Walk-in-Interview Walk-in-interview will be held on October 5, 2013 at 10:00 A.M. at IASRI, New Delhi for a project “A New Distributed Computing...LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
By Neel 2761 days agogithub.com - LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences. The Program first constructs all exact match pairs by a suffix-array based algorithm and extends them to long highly similar pairs. Then...Shendure Lab
The Shendure Lab is part of the Department of Genome Sciences at the University of Washington (Seattle, WA). The mission of the lab is to develop and apply new technologies in genomics and molecular biology. Most projects in the lab exploit new DNA...Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
By Jit 2623 days agogenomearchitect.github.io - Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and transposable elements; each annotation type has its own...Network Analysis @ Indian Statistical Institute
Indian Statistical Institute Kolkata invites applications for the following posts 2013 Oct Advertisement from Indian Statistical Institute Post: Network Analysis No. of Positions: 01 Educational Qualifications: Candidate should have...5700 year-old human genome !
By Jit 2421 days agoScientists have reconstructed the genome of an ancient human who lived nearly 5,700 years ago in Southern Denmark from the birch pitch- an ancient tar-like substance.Troyanskaya Lab
In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...
