github.com - Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...
The Institute is working relentlessly on developing technologies for sustainable utilization of Himalayan bioresources, and in the area of tea, floriculture, bamboos and medicinal and aromatic plants. Looking at the mission of the Institute,the...
github.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set.
Detail paper...
Central University of South Bihar
(Established under Central Universities Act, 2009)
BIT Campus, PO: B.V. College,
Patna – 800 014 (Bihar)
Employment Notice No. CUSB / 27 / Faculty / 2015
Appointment for Faculty Positions Applications...
bix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...
Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram
Job Code: 060815(10)Y
Jr Research Fellow Posts At Rajiv Gandhi Centre for Biotechnology
Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications to recruit on vacant...
github.com - ReMILO, a reference assisted misassembly detection algorithm that uses both short reads and PacBio SMRT long reads. ReMILO aligns the initial short reads to both the contigs and reference genome, and then constructs a novel data structure called...
DEPARTMENT OF BIOTECHNOLOGY
ALL INDIA INSTITUTE OF MEDICAL SCIENCES
NEW DELHI-110029
Requirement of Senior Research Fellow Applications are invited for the following vacancy under Research project entitled “Exploiting temporal transcription...
sourceforge.net - Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like...
This 2 day symposium will focus on topics in the below mentioned areas.
Experts from India and Japan in this fields will deliver lectures and contribute in discussions. This will provide an opportunity to the participants to interact and...