Jit
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IRscope: an online program to visualize the junction sites of chloroplast genomes
By Neel 1462 days agosites.google.com - eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust...Research Scientist – Bioinformatics at Sidra Medical and Research Center
Sidra Medical and Research Center(Doha, Qatar) is looking for talented Research Scientists (Bioinformatics / NGS Data Analysis). Research Scientists within the Bioinformatics Program are involved in research related to cutting edge genomics and...COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly
By Jit 2547 days agoftp.genomics.org.cn - An efficient tool called Connecting Overlapped Pair-End (COPE) reads, to connect overlapping pair-end reads using k-mer frequencies. We evaluated our tool on 30× simulated pair-end reads from Arabidopsis thaliana with 1% base error. COPE...INTERNSHIP @ NIPGR
Applications are invited from suitable candidates for six months ‘Training Fellowship' at National Institute of Plant Genome Research (NIPGR). About National Institute Of Plant Genome Research (NIPGR) http://www.nipgr.res.in/ The National...MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads
By Rahul Nayak 2391 days agogithub.com - MECAT is an ultra-fast Mapping, Error Correction and de novo Assembly Tools for single molecula sequencing (SMRT) reads. MECAT employs novel alignment and error correction algorithms that are much more efficient than the state of art of aligners and...Java utilities for Next Generation Sequencing by Pierre Lindenbaum
By Robert M Willioms 3725 days agogithub.com - Java utilities for Bioinformatics https://github.com/lindenb/jvarkitBlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive...
By Jit 2379 days agobix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...KAU Thrissur Biotech/Bioinformatics RA/SRF/JRF/Trainee/Studentships
Applications are invited from eligible candidates for the following posts at Bioinformatics Centre (DIC), IT- BT Complex, College of Horticulture, Kerala Agricultural University, Vellanikkara, Thrissur. 1. Research Associate Emoluments*:...Breakpointer: using local mapping artifacts to support sequence breakpoint discovery from...
By Jit 2359 days agogithub.com - Breakpointer is a fast tool for locating sequence breakpoints from the alignment of single end reads (SE) produced by next generation sequencing (NGS). It adopts a heuristic method in searching for local mapping signatures created by...FACULTY POSITION at NATIONAL INSTITUTE OF TECHNOLOGY, ROURKELA
NIT, Rourkela, an institute of national importance under Ministry of HRD, Govt. of India invites applications from Indian nationals possessing excellent academic background along with commitment to quality teaching and research for faculty positions...
