Jit
Enthusiast computational biologist with business dream !!!
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Post-Doc Positions at the Institute of Evolution, University of Haifa, Haifa, Israel
We are looking for independent, motivated, diligent, laborious, dedicated Bioinformaticians as post-doctorate fellows for a project aimed at revealing the mechanisms of cancer-resistance and anti-cancer activity of the hypoxia-tolerant subterranean,...MIX: Combining multiple assemblies from NGS data
By Rahul Nayak 2861 days agogithub.com - Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices...HALC: High throughput algorithm for long read error correction
By Jit 2830 days ago Comments (1)github.com - HALC, a high throughput algorithm for long read error correction. HALC aligns the long reads to short read contigs from the same species with a relatively low identity requirement so that a long read region can be aligned to at least one contig...Project Assistant Position at JMI
Project Assistant Position (@ Rs.10,000/pm Fixed) is available for one year ina research project funded by the Department of Science and Technology entitled, "Folding and stability of naturally truncated photosynthetic pigment,C- phycoerythrin from...KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
By Jit 2802 days ago Comments (1)github.com - KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts. The following tools are currently available in KAT: hist: Create an histogram of k-mer occurrences from a sequence file. Adds metadata in...JAMIA HAMDARD Bioinformatics Faculty Jobs 2014
JAMIA HAMDARD (Deemed University) Hamdard Nagar, New Delhi – 110 062 R E C R U I T M E N T (Advertisement No. 5/2014) Applications on prescribed form are invited for filling up the following teaching positions in the Department of...
List of non-commercial NGS genotype-calling software
Last updated 2768 days ago by Jit Comments (1)Meaningful analysis of next-generation sequencing (NGS) data, which are produced extensively by genetics and genomics studies, relies crucially on the accurate calling of SNPs and genotypes. Recently developed statistical methods both improve and...Joao Pedro de Magalhaes Lab
Ageing has a profound impact on human society and modern medicine, yet it remains a major puzzle of biology. The goal of my work is to help understand the genetic, cellular, and molecular mechanisms of ageing. In the long term, I would like my work...BASE: a practical de novo assembler for large genomes using long NGS reads
By Rahul Nayak 2697 days agogithub.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...Postgraduate Research Associate Bioinformatics / Computational Biology (Reference code: 59)
The Department of Biotechnology, group “Genome Bioinformatics” is currently seeking a Postgraduate Research Associate Bioinformatics / Computational Biology (Reference code: 59) Extent of employment: 30 Hours per Week Duration of employment: 1st...
