Rahul Nayak
A Bioinformatician
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Genome of Rainbow Trout Sequenced
By Rahul Agarwal 3864 days agohttp://www.nature.com/ncomms/2014/140422/ncomms4657/full/ncomms4657.html
miRNA database and tools
Last updated 3697 days ago by Rahul AgarwalSince few years miRNA has shown to play important role in therapeutic related research and also known to play vital role in controlling gene expression specifically at transcriptional and post-transcription levels. Here are some important DBs and...Scaffolding of a bacterial genome using MinION nanopore sequencing
By Rahul Agarwal 3426 days agowww.nature.com - Second generation sequencing has revolutionized genomic studies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical sequencers, so the genomic order of several generated contigs cannot...Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
By Strand 2956 days agoLive Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports an extensive workflow for the analysis and visualization of RNA-Seq data. The workflow includes Transcriptome / Genome alignment, Differential expression analysis with Statistical...simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
By Jit 2551 days agowww.ebi.ac.uk - simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations only incorporate noise due to sequencing and do not incorporate effects from...vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
By Jit 1760 days agogenome.sph.umich.edu - vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vtUni Computing Bergen Norway
Info on Uni Computing (Webpage: http://www.bccs.uni.no/) : Uni Computing (formerly Uni BCCS) is a department of Uni Research, affiliated with the University of Bergen. 5 groups in this lab works on computational resources, methods, algorithms,...What Junk DNA? It’s an Operating System
By Rahul Agarwal 4113 days agowww.genengnews.com - The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, space-filling material that happens to make up nearly 98% of the...Illumina reveals first dataset of long reads
By Rahul Agarwal 4109 days agoWith the help of Moleculo technology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is around 8,500 base pairs in release dataset. Best thing about this, there...
