Jit
Enthusiast computational biologist with business dream !!!
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BioJupies: Automatically Generates RNA-seq Data Analysis Notebooks
By Rahul Nayak 1906 days agoamp.pharm.mssm.edu - With BioJupies you can produce in seconds a customized, reusable, and interactive report from your own raw or processed RNA-seq data through a simple user interface BioJupies now supports user accounts! Sign in from the top right corner of the page...Fundamentals of Data Visualization by Claus O. Wilke
By Abhi 640 days agoclauswilke.com - The book is meant as a guide to making visualizations that accurately reflect the data, tell a story, and look professional. It has grown out of my experience of working with students and postdocs in my laboratory on thousands of data...HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution
By Jit 2953 days agogithub.com - Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution" Preprint: http://biorxiv.org/content/early/2016/08/01/062117 Paper: http://genome.cshlp.org/content/27/5/747.full An ipython notebook to...RefKA: A fast and efficient long-read genome assembly approach for large and complex genomes
By Rahul Nayak 2139 days agogithub.com - RefKA, a reference-based approach for long read genome assembly. This approach relies on breaking up a closely related reference genome into bins, aligning k-mers unique to each bin with PacBio reads, and then assembling each bin in parallel...
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4619 days ago320000 viruses in mammals yet to sequenced in future!!!
By Rahul Agarwal 4571 days ago70 per cent of emerging viral diseases such as HIV/AIDS, West Nile, Ebola, SARS, and influenza, are zoonoses - infections of animals that cross into humans.RNA Bioinformatics and High Throughput Analysis Jena
Research Topics: High Throughput Sequencing Analysis Comparative Genomics Identification and Annotation of Non-coding RNAs Bioinformatic Analysis and System Biology of Viruses Coevolution of Proteins and RNAs Algorithmic...Bio-Rad Acquires GnuBIO
By Rahul Agarwal 4343 days agoGnuBIO-Developer of Droplet-Based DNA Sequencing TechnologyDeadly Human Pathogen Cryptococcus Sequenced
By Rahul Agarwal 4337 days agoCryptococcus neoformans is a fungus responsible for a million cases of pneumonia and meningitis every year- are so malleable and dangerous
