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OGDRAW - Draw Organelle Genome Maps
By Abhi 1615 days agochlorobox.mpimp-golm.mpg.de - OrganellarGenomeDRAW converts annotations in the GenBank or EMBL/ENA format into graphical maps. The input has to be a GenBank or EMBL/ENA flat file wherase the output can vary among several types of files....UniqueKmer: Generate unique KMERs for every contig in a FASTA file
By Abhi 1542 days agogithub.com - Generate unique k-mers for every contig in a FASTA file. Unique k-mer is consisted of k-mer keys (i.e. ATCGATCCTTAAGG) that are only presented in one contig, but not presented in any other contigs (for both forward and reverse strands). This tool...Comparative Genomics Workshops !
By Rahul Nayak 1502 days agowww.genome.gov - This meeting's objective was to obtain a big picture look at the current state of the field of comparative genomics with a focus on commonalities across genomic investigations into humans, model organisms (both traditional and...Environmental Genomics Group SciLifeLab/KTH Stockholm
By BioStar 1193 days agohttps://github.com/envgen - Useful Metagenomics resourcesNCBI Datasets pages
By BioStar 969 days agoAssembly and Genome record pages now redirect to new NCBI Datasets pages.Entire Human Genome Sequencing !
By LEGE 705 days agoCost-effective whole human genome sequencing has revolutionized the landscape of genetic research and personalized medicine by making comprehensive genetic analysis accessible to a wider population. Through advancements in sequencing technologies,...piRNA and Bioinformatics: Decoding the Guardians of the Genome
By LEGE 456 days agopiRNAs are the unsung guardians of the genome, safeguarding genetic material from transposable elements and contributing to gene regulation and epigenetic programming. Bioinformatics has opened the floodgates of discovery, unraveling the...NVIDIA and Arc Institute Unveil Evo 2: A Breakthrough AI for DNA Design
By BioStar 379 days agoNVIDIA and the Arc Institute have introduced Evo 2, a groundbreaking AI model designed to understand, predict, and generate DNA sequences. This marks a major advancement in computational biology, offering scientists an unprecedented tool to decode...SIMA C++ Implementation: Simultaneous Multiple Alignment of LC/MS Peak Lists
By Neel 3026 days agohciweb.iwr.uni-heidelberg.de - This is the c++ implementation for SIMA - Simultaneous Multiple Alignment of LC/MS Peak Lists. The package contains C++ source code as well as two binary files. The latter were tested under various operating systems, including Windows XP SP3 32bit,...MIX: Combining multiple assemblies from NGS data
By Rahul Nayak 2861 days agogithub.com - Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices...
