Jit
Enthusiast computational biologist with business dream !!!
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Sequence assembly with MIRA 4
By Priya Singh 3154 days ago Comments (1)mira-assembler.sourceforge.net - MIRA is a multi-pass DNA sequence data assembler/mapper for whole genome and EST/RNASeq projects. MIRA assembles/maps reads gained by electrophoresis sequencing (aka Sanger sequencing) 454 pyro-sequencing (GS20, FLX or Titanium) Ion...QUAST: quality assessment tool for genome assemblies
By Jitendra Prajapati 3153 days ago Comments (2)bioinformatics.oxfordjournals.org - QUAST evaluates genome assemblies. For metagenomes, please see MetaQUAST project.It can works both with and without a given reference genome.The tool accepts multiple assemblies, thus is suitable for comparison. More...Understanding Fastqc Output
By Jit 3145 days agowww.bioinformatics.babraham.ac.uk - Understanding Following table and graphs Duplication level kmer profile per base GC content per base N content per base quality per base sequence content per sequence GC content per sequence quality sequence length distribution More at...
Worldwide funding agencies to fund your bioinformatics research !!
Last updated 3140 days ago by Jitendra Prajapati Comments (5)Are you seeking funding for research or training in a particular area? Check out the following agencies ... National Science Foundation: For the love of science! Head here when searching for ways to pay for that gargantuan geology or bigtime...Venn Diagrams on R Studio
By Jitendra Prajapati 3134 days ago Comments (2)rstudio-pubs-static.s3.amazonaws.com - First step: Install & load “VennDiagram” package. # install.packages('VennDiagram') library(VennDiagram) Second step: Load data Add filepath if “catdoge.csv” is not in working-directory. d <-...CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
By Jit 3133 days ago Comments (2)github.com - Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software is currently alpha level, feel free to use and report issues encountered. Canu is...Bioinformatics Faculty at TNU
TNU is hiring faculty as Professors, Associate Professors and Assistant Professors in the following research and teaching programs. Basic Sciences Biotechnology & Bioinformatics Qualifications are as per UGC norms. Please visit...YASS :: genomic similarity search tool
By Jit 3128 days agobioinfo.lifl.fr - YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it produces local pairwise alignments). Like most of the heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST,...SLURM
By Jit 3126 days agowiki.fysik.dtu.dk - SLURM workload manager software, a free open-source workload manager designed specifically to satisfy the demanding needs of high performance computing. This page is a HOWTO guide for setting up a SLURM installation, currently focused on a CentOS 7...Summer internship positions at DuPont
DuPont Industrial Biosciences has several summer internship positions for undergrads available. We are looking for driven and creative interns to conduct research in the following areas: ยท Enzyme immobilization supports for select enzyme...
