Rahul Nayak
A Bioinformatician
Our Sponsors
Related items
Ancient whole genome duplication (WGD) detection tools !
By Rahul Nayak 1925 days agoThere are two methods for ancient WGD detection, one is collinearity analysis, and the other is based on the Ks distribution map. Among them, Ks is defined as the average number of synonymous substitutions at each synonymous site, and there is...Josefa González Lab
Lab focus on understanding how organisms adapt to their environments. They combine omics approaches with detailed molecular and phenotypic analyses to get a comprehensive picture of adaptation. Our aim at being internationally recognized as a...maftools
By Surabhi Chaudhary 1640 days agogithub.com - With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widely accepted and used to store somatic variants detected. The Cancer Genome Atlas Project has sequenced over 30 different cancers with sample size of each cancer type...Comparative genomics visualisation tools !
By Neel 1578 days agocmdcolin.github.io - Comparative genomics visualisation tools !GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 1487 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...bacLIFE: an automated genome mining tool for identification of lifestyle associated genes
By BioStar 821 days agogithub.com - bacLIFE is a streamlined computational workflow that annotates bacterial genomes and performs large-scale comparative genomics to predict bacterial lifestyles and to pinpoint candidate genes, denominated lifestyle-associated genes (LAGs), and...
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4714 days ago320000 viruses in mammals yet to sequenced in future!!!
By Rahul Agarwal 4667 days ago70 per cent of emerging viral diseases such as HIV/AIDS, West Nile, Ebola, SARS, and influenza, are zoonoses - infections of animals that cross into humans.Tools to detect synteny blocks regions among multiple genomes
By Jitendra Narayan 4653 days ago Comments (24)Collections of synteny detection tools and related materialsMedGenome is looking for Genome Analysts
MedGenome is looking for Genome Analysts (5-6 Positions), ambitious and energetic who will work both independently and as part of a collaborative team to generate data from various genomics-oriented workflows and assist in the optimization and...
