Jit
Enthusiast computational biologist with business dream !!!
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Latest paper on comparison of mapping tools
By Rahul Agarwal 4568 days ago Comments (1)www.biomedcentral.com - A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14(1):184, 2013. http://bmi.osu.edu/hpc/software/benchmark/ http://bmi.osu.edu/hpc/software/pmap/pmap.html Other similiar...Largest Genome Sequenced
By Rahul Agarwal 4369 days agowww.news.ucdavis.edu - The enormous size of the loblolly pine genome having 22 billion base pairs compared to only 3 billion in the human genome. In other words, it is seven times larger than a human’s and also the largest and the most...New RNA Seq tool
By Rahul Agarwal 4334 days ago Comments (4)www.genengnews.com - "By removing the time-consuming step of read mapping, the authors reported, Sailfish able to provide quantification estimates 20–30 times faster than current methods without loss of accuracy." Tool...GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
By Rahul Agarwal 3898 days ago Comments (1)github.com - GraphMap is a novel mapper targeted at aligning long, error-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d reads with very high sensitivity and accuracy, and also presents a significant...MetaSim A Sequencing Simulator for Genomics and Metagenomics.
By Jit 3016 days agoab.inf.uni-tuebingen.de - Our software can be used to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a database of given genomes, the program allows the user to design a...Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm
By BioStar 2183 days agogithub.com - Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a single run and polish the assemblies of genomes of any size. Described by Firtina et al. (preliminary version...
Genetic Test in India
Last updated 4591 days ago by Rahul Agarwal1.Xcode Life Sciences Pvt. Ltd.6B, Eldorado, 112, Nungambakkam High Road,Nungambakkam, Chennai 600034Tamil Nadu, India 2.Mapmygenome™Royal Demeure,HUDA Techno Enclave,Plot No. 12/2, Sector-1 500 081 Madhapur,HyderabadAP,...Statistics of current Sequencing and Bioinformatics market
By Rahul Agarwal 4582 days agowww.ogt.com - This survey conducted by Oxford Gene Technology, provider of innovative genetics research and biomarker solutions to advance molecular medicine, has released the results from a recent survey of researchers...Bioinformatics course and lectures
By Rahul Agarwal 4568 days agogtpb.igc.gulbenkian.pt - http://openwetware.org/wiki/User:Jarle_Pahr/Bioinformatics
