Rahul Agarwal
I'm a Bioinformatician and Programmer
Our Sponsors
Related items
DeepVariant : an analysis pipeline that uses a deep neural network to call genetic variants from...
By Jit 2232 days agogithub.com - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation...iSeqQC: a tool for expression-based quality control in RNA sequencing
By BioStar 2210 days agogithub.com - iSeqQC, an expression-based QC tool that detects outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC implements various statistical approaches including unsupervised clustering,...FastProNGS: fast preprocessing of next-generation sequencing reads
By Rahul Nayak 1896 days agogithub.com - FastProNGS to integrate the quality control process with automatic adapter removal. Parallel processing was implemented to speed up the process by allocating multiple threads. Compared with similar up-to-date preprocessing tools, FastProNGS is by...
Libraries or management tools for high throughput sequencing data
Last updated 519 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...ArrayGen Bioinformatics Genomics Group
Category: researchlabs:Bioinformatics
PI: ArrayGen Technologies
By ArrayGen Technologies 4177 days agoArrayGen is a global bioinformatics company which is a one stop solution for microarray designing and genomics data analysis. Our novel Array Design Approach Strategy (ADAS) aims to condense the time lag between demands of scientific community and...The Story of You: ENCODE and the human genome
By Jitendra Narayan 4577 days agoEver since a monk called Mendel started breeding pea plants we've been learning about our genomes. In 1953, Watson, Crick and Franklin described the structure of the molecule that makes up our genomes: the DNA double helix. Then, in 2001, scientists...Reference Sequence Resource!
By LEGE 1633 days agowww.encodeproject.org - The ENCODE project uses Reference Genomes from NCBI or UCSC to provide a consistent framework for mapping high-throughput sequencing data. In general, ENCODE data are mapped consistently to 2 human (GRCH38, hg19) and 2 mouse...Manolis Kellis Lab
A major focus of our lab is understanding the effects of genetic variation on molecular phenotypes and human disease. We develop methods for integrating diverse functional genomic datasets of transcription, chromatin modifications, regulator...SOWDHAMINI Lab
Genome sequencing projects have enormous potential for benefiting human endeavors. However, just as acquiring a language's vocabulary does not enable one to speak it, databases that list the amino acid composition of proteins do not directly tell us...Surrogate Variable Analysis (SVA)
By Jit 4145 days agoThe sva package contains functions for removing batch effects and other unwanted variation in high-throughput experiment.
